STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64198.1Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: pmf:P9303_07651 phage integrase family. (393 aa)    
Predicted Functional Partners:
EHA64199.1
PFAM: Methyltransferase type 11; KEGG: pmt:PMT1242 methyltransferase.
       0.814
EHA64200.1
TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: pmf:P9303_07631 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR.
       0.813
EHA63256.1
KEGG: pmt:PMT0811 hypothetical protein.
  
     0.755
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
  
     0.752
EHA60366.1
KEGG: pmt:PMT1440 hypothetical protein.
  
     0.750
EHA63281.1
KEGG: pmt:PMT0793 ribonucleotide reductase (class II); TIGRFAM: Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.739
EHA63235.1
KEGG: pmf:P9303_12241 hypothetical protein.
  
     0.737
EHA64274.1
KEGG: cyn:Cyan7425_3822 hypothetical protein.
  
     0.736
EHA64297.1
KEGG: pmt:PMT1367 hypothetical protein.
  
     0.689
EHA63886.1
KEGG: pmt:PMT0527 hypothetical protein.
  
     0.670
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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