STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64204.1PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; KEGG: chl:Chy400_0772 deoxyribodipyrimidine photo-lyase. (552 aa)    
Predicted Functional Partners:
EHA63395.1
PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: pmb:A9601_04781 hypothetical protein.
 
   
 0.766
EHA62295.1
PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: syf:Synpcc7942_1867 deoxyribodipyrimidine photo-lyase family protein.
  
     0.761
EHA63492.1
KEGG: pmf:P9303_18741 chalcone synthase (CHS); PFAM: Chalcone/stilbene synthase, C-terminal; Chalcone/stilbene synthase, N-terminal.
    
   0.692
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.692
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
   0.692
EHA59368.1
PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: pmf:P9303_22461 low molecular weight phosphotyrosine protein phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight.
    
   0.692
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.
       0.689
EHA64058.1
TIGRFAM: Conserved hypothetical protein CHP03643; KEGG: pmg:P9301_04451 hypothetical protein.
 
     0.601
EHA64206.1
KEGG: pmt:PMT1249 peptidoglycan synthetase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
       0.546
EHA64207.1
KEGG: pmt:PMT1250 hypothetical protein.
       0.546
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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