STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64208.1PFAM: Abortive infection protein; KEGG: pmt:PMT1251 membrane-associated protease. (436 aa)    
Predicted Functional Partners:
EHA64206.1
KEGG: pmt:PMT1249 peptidoglycan synthetase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
       0.572
EHA64210.1
KEGG: pmt:PMT1253 putative dihydroorotase.
  
    0.551
EHA64207.1
KEGG: pmt:PMT1250 hypothetical protein.
       0.545
EHA64209.1
Phosphoglycerate mutase; KEGG: pmt:PMT1252 putative alpha-ribazole-5'-P phosphatase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; Belongs to the phosphoglycerate mutase family.
       0.539
EHA60080.1
KEGG: pmf:P9303_19571 hypothetical protein.
  
     0.533
clpS
ATP-dependent Clp protease adapter protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
 
    0.509
EHA64226.1
KEGG: pmf:P9303_07351 hypothetical protein.
  
     0.489
EHA64327.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_06461 putative multidrug efflux ABC transporter; SMART: ATPase, AAA+ type, core.
   
 
 0.474
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.
       0.470
EHA64328.1
PFAM: ABC-2 type transporter; KEGG: pmf:P9303_06471 putative multidrug efflux ABC transporter.
   
  
 0.462
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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