STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64245.1KEGG: amr:AM1_3139 hypothetical protein. (343 aa)    
Predicted Functional Partners:
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
 
     0.905
panC/cmk
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
  
  0.898
EHA64246.1
KEGG: pmf:P9303_07041 hypothetical protein.
 
     0.852
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
 
     0.843
EHA64247.1
Protein of unknown function DUF111; KEGG: pmf:P9303_07031 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0272; PFAM: Uncharacterised protein family UPF0272; Belongs to the LarC family.
       0.757
EHA64212.1
KEGG: pmf:P9303_07491 hypothetical protein.
  
     0.741
pyrE-2
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
  
  0.736
EHA63368.1
Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein.
  
     0.691
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.686
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.668
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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