STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64247.1Protein of unknown function DUF111; KEGG: pmf:P9303_07031 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0272; PFAM: Uncharacterised protein family UPF0272; Belongs to the LarC family. (403 aa)    
Predicted Functional Partners:
EHA59341.1
Conserved hypothetical protein CHP00268; KEGG: pmf:P9303_22871 ATP-utilizing enzymes of the PP-loop superfamily protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: Asparagine synthase.
 
 0.987
EHA58605.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; PFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: pmf:P9303_19441 putative circadian phase modifier CpmA-like protein.
 
  
 0.899
EHA64246.1
KEGG: pmf:P9303_07041 hypothetical protein.
       0.800
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
       0.800
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
       0.774
EHA64245.1
KEGG: amr:AM1_3139 hypothetical protein.
       0.757
EHA64250.1
KEGG: pmf:P9303_07001 hypothetical protein.
       0.532
EHA64317.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmt:PMT1348 aldo/keto reductase.
 
     0.511
EHA60433.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmf:P9303_04491 aldo/keto reductase family protein.
 
     0.482
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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