Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHA64248.1KEGG: syf:Synpcc7942_0084 hypothetical protein. (212 aa)    
Predicted Functional Partners:
EHA64245.1
KEGG: amr:AM1_3139 hypothetical protein.
 
     0.905
EHA64246.1
KEGG: pmf:P9303_07041 hypothetical protein.
 
     0.890
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
 
     0.834
EHA64247.1
Protein of unknown function DUF111; KEGG: pmf:P9303_07031 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0272; PFAM: Uncharacterised protein family UPF0272; Belongs to the LarC family.
       0.773
EHA63368.1
Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein.
  
     0.772
EHA63969.1
KEGG: pmf:P9303_12321 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein.
   
 0.771
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
   
 0.768
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.768
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
     0.767
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
     0.767
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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