Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA64292.1KEGG: pmt:PMT1373 AAA ATPase family protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core. (508 aa)    
Predicted Functional Partners:
EHA60082.1
KEGG: syf:Synpcc7942_1393 histone deacetylase/AcuC/AphA family protein-like; PFAM: Histone deacetylase superfamily.
    
 0.926
EHA60238.1
KEGG: mrb:Mrub_0437 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; Belongs to the FGGY kinase family.
   
  0.877
EHA59338.1
KEGG: pmf:P9303_22901 hypothetical protein.
    
 0.876
EHA64294.1
Membrane protein insertase, YidC/Oxa1 family; KEGG: pmt:PMT1371 putative inner membrane protein translocase component YidC; TIGRFAM: Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC.
   
 
 0.827
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
   
  0.822
EHA64348.1
PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; KEGG: pmt:PMT1319 secreted protein MPB70 precursor.
    
 0.818
EHA64293.1
PFAM: Protein of unknown function DUF177; KEGG: pmf:P9303_06081 metal-binding protein.
       0.815
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
 0.812
EHA61855.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
    
 0.811
EHA60371.1
KEGG: syf:Synpcc7942_1129 hypothetical protein.
    
 0.796
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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