Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA64299.1KEGG: pmf:P9303_06151 signal peptide peptidase SppA (protease IV); TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49. (270 aa)    
Predicted Functional Partners:
EHA64298.1
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.815
EHA64300.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmt:PMT1364 SMR family transporter PecM.
       0.641
EHA64302.1
PFAM: Glycosyl transferase, family 39; KEGG: pmf:P9303_06171 4-amino-4-deoxy-L-arabinose transferase.
       0.640
EHA64297.1
KEGG: pmt:PMT1367 hypothetical protein.
       0.611
EHA64301.1
PFAM: Glycosyl transferase, group 1; KEGG: pmj:P9211_12651 glycosyl transferase group 1.
       0.560
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
  0.558
nadK-2
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
  0.558
EHA64211.1
TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family.
      
 0.438
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.406
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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