STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64300.1Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmt:PMT1364 SMR family transporter PecM. (320 aa)    
Predicted Functional Partners:
EHA64302.1
PFAM: Glycosyl transferase, family 39; KEGG: pmf:P9303_06171 4-amino-4-deoxy-L-arabinose transferase.
       0.800
EHA64301.1
PFAM: Glycosyl transferase, group 1; KEGG: pmj:P9211_12651 glycosyl transferase group 1.
       0.785
EHA63289.1
KEGG: pmf:P9303_14241 hypothetical protein.
  
     0.629
EHA64314.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: pmf:P9303_06321 hypothetical protein.
  
     0.618
EHA64298.1
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.611
EHA64299.1
KEGG: pmf:P9303_06151 signal peptide peptidase SppA (protease IV); TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49.
       0.611
EHA59154.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_00551 putative photosystem I assembly related protein Ycf37.
  
     0.585
EHA63354.1
KEGG: pmt:PMT0745 hypothetical protein.
  
     0.576
EHA64129.1
KEGG: pmf:P9303_18151 hypothetical protein.
  
     0.560
EHA62356.1
KEGG: pme:NATL1_20551 hypothetical protein.
  
     0.549
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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