STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64310.1PFAM: ABC transporter-like; KEGG: pmn:PMN2A_1766 ATPase; SMART: ATPase, AAA+ type, core. (247 aa)    
Predicted Functional Partners:
EHA63448.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: pmf:P9303_15441 putative ABC transporter.
 0.998
EHA63044.1
Efflux transporter, RND family, MFP subunit; KEGG: pmf:P9303_08701 membrane fusion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.948
EHA63551.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: msl:Msil_3893 protein of unknown function DUF214.
 
 0.918
EHA63829.1
DevC protein; KEGG: pmt:PMT0588 ABC-transporter, membrane spanning component; TIGRFAM: DevC protein; PFAM: Domain of unknown function DUF214, ABC transporter permease.
 
 0.918
EHA60587.1
Efflux transporter, RND family, MFP subunit; KEGG: pmf:P9303_02661 membrane-fusion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.862
EHA62498.1
Efflux transporter, RND family, MFP subunit; KEGG: pmt:PMT0130 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.858
EHA63526.1
KEGG: cyt:cce_0005 hypothetical protein.
   
 0.837
ndhB
NAD(P)H-quinone oxidoreductase subunit 2; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
       0.800
EHA64316.1
KEGG: pmt:PMT1349 hypothetical protein.
    
  0.798
EHA64309.1
Two component transcriptional regulator, winged helix family; KEGG: pmt:PMT1357 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
     
 0.734
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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