Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA64320.1KEGG: pmf:P9303_06381 hypothetical protein. (196 aa)    
Predicted Functional Partners:
EHA63228.1
KEGG: pmf:P9303_12131 hypothetical protein.
  
     0.773
EHA62061.1
Porin; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.730
EHA61818.1
PFAM: Protein of unknown function DUF456; KEGG: pmt:PMT2047 hypothetical protein.
  
     0.658
EHA59094.1
KEGG: pmf:P9303_30181 esterase/lipase/thioesterase family protein.
  
     0.649
EHA63691.1
KEGG: syc:syc1602_d hypothetical protein.
  
     0.627
EHA63150.1
TIGRFAM: NHPM bacteriocin system secretion protein, HylD; KEGG: ana:all2022 hypothetical protein.
  
     0.624
EHA63368.1
Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein.
  
     0.623
EHA63154.1
KEGG: cyn:Cyan7425_3675 protein of unknown function DUF939.
  
     0.609
EHA64255.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein; Belongs to the OprB family.
  
     0.596
EHA63944.1
PFAM: Protein of unknown function DUF1295; KEGG: cyn:Cyan7425_2218 protein of unknown function DUF1295.
  
     0.576
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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