STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64338.1PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT1329 hypothetical protein. (310 aa)    
Predicted Functional Partners:
EHA63400.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: pmf:P9303_14981 putative D-Ala-D-Ala carboxypeptidase 3 (S13) family protein; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C.
 
  
 0.840
plqA
UbiA prenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family.
       0.785
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.784
EHA63620.1
KEGG: pmf:P9303_18931 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
     
 0.753
EHA60643.1
PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: pmf:P9303_26161 beta-N-acetylglucosaminidase.
  
  
 0.699
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
  
  0.629
EHA63298.1
PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: pmf:P9303_16751 putative carboxypeptidase.
     
 0.601
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
     
 0.584
EHA64340.1
Ppx/GppA phosphatase; KEGG: pmt:PMT1327 putative exopolyphosphatase; PFAM: Ppx/GppA phosphatase.
       0.567
EHA61875.1
KEGG: pmf:P9303_27821 hypothetical protein.
     
 0.480
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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