STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64346.1KEGG: pme:NATL1_05181 hypothetical protein. (122 aa)    
Predicted Functional Partners:
EHA59082.1
KEGG: pmt:PMT2258 hypothetical protein.
  
     0.773
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.765
EHA63286.1
KEGG: pmf:P9303_14221 hypothetical protein.
  
     0.759
EHA63289.1
KEGG: pmf:P9303_14241 hypothetical protein.
  
     0.757
EHA64383.1
KEGG: pmf:P9303_18001 hypothetical protein.
  
     0.757
EHA59345.1
KEGG: pmf:P9303_22751 hypothetical protein.
  
     0.752
EHA63192.1
Protein of unknown function DUF2488; PFAM: Uncharacterised protein family Ycf54; KEGG: syf:Synpcc7942_0988 hypothetical protein.
  
     0.750
EHA60382.1
30S ribosomal protein 3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.748
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.745
EHA59154.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_00551 putative photosystem I assembly related protein Ycf37.
  
     0.738
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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