Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHA59278.1 | EHA64211.1 | Syn8016DRAFT_2648 | Syn8016DRAFT_1254 | KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal. | TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family. | 0.707 |
| EHA59278.1 | gmk | Syn8016DRAFT_2648 | Syn8016DRAFT_1392 | KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.463 |
| EHA59278.1 | tatC | Syn8016DRAFT_2648 | Syn8016DRAFT_1390 | KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.468 |
| EHA62489.1 | tatA | Syn8016DRAFT_1784 | Syn8016DRAFT_1541 | KEGG: cyt:cce_0793 hypothetical protein. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.671 |
| EHA62489.1 | tatC | Syn8016DRAFT_1784 | Syn8016DRAFT_1390 | KEGG: cyt:cce_0793 hypothetical protein. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.772 |
| EHA63555.1 | tatA | Syn8016DRAFT_0596 | Syn8016DRAFT_1541 | PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: llo:LLO_0930 multicopper oxidase. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.671 |
| EHA63555.1 | tatC | Syn8016DRAFT_0596 | Syn8016DRAFT_1390 | PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: llo:LLO_0930 multicopper oxidase. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.772 |
| EHA64211.1 | EHA59278.1 | Syn8016DRAFT_1254 | Syn8016DRAFT_2648 | TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family. | KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal. | 0.707 |
| EHA64211.1 | secF | Syn8016DRAFT_1254 | Syn8016DRAFT_0706 | TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily. | 0.598 |
| EHA64211.1 | tatA | Syn8016DRAFT_1254 | Syn8016DRAFT_1541 | TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.511 |
| EHA64211.1 | tatC | Syn8016DRAFT_1254 | Syn8016DRAFT_1390 | TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.442 |
| EHA64348.1 | gmk | Syn8016DRAFT_1391 | Syn8016DRAFT_1392 | PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; KEGG: pmt:PMT1319 secreted protein MPB70 precursor. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.608 |
| EHA64348.1 | tatC | Syn8016DRAFT_1391 | Syn8016DRAFT_1390 | PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; KEGG: pmt:PMT1319 secreted protein MPB70 precursor. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.677 |
| gmk | EHA59278.1 | Syn8016DRAFT_1392 | Syn8016DRAFT_2648 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal. | 0.463 |
| gmk | EHA64348.1 | Syn8016DRAFT_1392 | Syn8016DRAFT_1391 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; KEGG: pmt:PMT1319 secreted protein MPB70 precursor. | 0.608 |
| gmk | tatC | Syn8016DRAFT_1392 | Syn8016DRAFT_1390 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.503 |
| petA | petB | Syn8016DRAFT_1387 | Syn8016DRAFT_2799 | Apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Cytochrome b/b6 domain protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.999 |
| petA | tatC | Syn8016DRAFT_1387 | Syn8016DRAFT_1390 | Apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.721 |
| petB | petA | Syn8016DRAFT_2799 | Syn8016DRAFT_1387 | Cytochrome b/b6 domain protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.999 |
| petB | tatC | Syn8016DRAFT_2799 | Syn8016DRAFT_1390 | Cytochrome b/b6 domain protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.492 |
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