STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64356.1PFAM: Protein of unknown function DUF1643; KEGG: pmt:PMT1311 hypothetical protein. (221 aa)    
Predicted Functional Partners:
EHA64358.1
PFAM: Cation/H+ exchanger; KEGG: pmf:P9303_06781 putative Na+/H+ antiporter, CPA1 family.
       0.784
EHA64355.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmt:PMT1312 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.773
EHA64357.1
KEGG: pmf:P9303_06771 hypothetical protein.
       0.773
EHA64354.1
Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: pmt:PMT1313 homologous to PilT2 protein; SMART: ATPase, AAA+ type, core.
       0.543
EHA62321.1
KEGG: pmf:P9303_25471 selenide, water dikinase; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; AIR synthase-related protein; AIR synthase-related protein, C-terminal.
  
     0.488
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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