STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64366.1KEGG: pme:NATL1_11791 hypothetical protein. (151 aa)    
Predicted Functional Partners:
EHA64367.1
KEGG: pmf:P9303_10261 hypothetical protein.
 
     0.653
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.621
EHA59355.1
KEGG: pmf:P9303_22651 hypothetical protein.
  
     0.601
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.589
EHA63888.1
KEGG: pmf:P9303_17401 hypothetical protein.
  
     0.585
EHA63705.1
PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein.
  
     0.583
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
     0.538
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
  
     0.522
EHA64321.1
KEGG: pmt:PMT1344 hypothetical protein.
  
     0.520
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
     0.502
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.