STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64367.1KEGG: pmf:P9303_10261 hypothetical protein. (105 aa)    
Predicted Functional Partners:
EHA59355.1
KEGG: pmf:P9303_22651 hypothetical protein.
  
     0.728
EHA63189.1
KEGG: pmf:P9303_09541 hypothetical protein.
  
     0.722
EHA60367.1
PFAM: Protein of unknown function DUF1818; KEGG: pmt:PMT1441 hypothetical protein.
  
     0.718
EHA64321.1
KEGG: pmt:PMT1344 hypothetical protein.
  
     0.698
EHA62269.1
KEGG: pmt:PMT1859 hypothetical protein.
  
     0.686
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.683
EHA58604.1
TIGRFAM: Conserved hypothetical protein CHP03792; KEGG: pmf:P9303_19451 hypothetical protein.
  
     0.679
EHA60623.1
KEGG: pmf:P9303_02201 hypothetical protein.
  
     0.672
EHA63949.1
KEGG: pmj:P9211_05761 hypothetical protein.
  
     0.667
EHA64135.1
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: pmc:P9515_12621 hypothetical protein; overlaps another CDS with the same product name.
  
     0.663
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.