STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64380.1Isoamylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; KEGG: pmf:P9303_05691 putative isoamylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; Belongs to the glycosyl hydrolase 13 family. (671 aa)    
Predicted Functional Partners:
EHA60240.1
Maltose alpha-D-glucosyltransferase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: cyb:CYB_0677 trehalose synthase/putative maltokinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
 
 0.988
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
0.987
EHA62345.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.964
EHA63127.1
4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; KEGG: pmt:PMT1071 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77.
 
 0.947
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.943
EHA63856.1
TIGRFAM: Glucose-1-phosphate adenylyltransferase; KEGG: pmf:P9303_16851 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.897
EHA63084.1
PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; KEGG: pmt:PMT1122 hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
     
 0.861
EHA60571.1
PFAM: Phycobilisome linker domain; KEGG: syf:Synpcc7942_2030 phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 0.759
EHA62187.1
Sucrose phosphorylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: pmj:P9211_06751 glycoside hydrolase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
 
 
 0.732
EHA60237.1
Cyclomaltodextrinase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: pmt:PMT0192 glycoside hydrolase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
 
 0.728
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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