STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64387.1SMP-30/Gluconolaconase/LRE-like region-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: ppm:PPSC2_c4886 diguanylate cyclase/phosphodiesterase with pas/pac and gaf sensor(s). (293 aa)    
Predicted Functional Partners:
EHA64388.1
Hypothetical protein.
       0.773
EHA63874.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: pmf:P9303_17291 putative oxidoreductase.
 
 
 0.768
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.755
EHA61846.1
Permease; KEGG: pmf:P9303_18531 permease.
     
 0.736
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.686
EHA63236.1
PFAM: Monooxygenase, FAD-binding; KEGG: pmf:P9303_12251 glucose-methanol-choline (GMC) oxidoreductase:NAD binding site.
  
 
 0.659
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
       0.645
EHA64139.1
GMC oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, C-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Glucose-methanol-choline oxidoreductase, N-terminal; KEGG: pmc:P9515_12661 hypothetical protein.
  
 
 0.640
EHA62276.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: pmf:P9303_24931 putative oxidoreductase.
  
 
 0.624
EHA63533.1
KEGG: pmy:Pmen_3664 glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
  
 
 0.587
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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