STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA64393.1KEGG: pmt:PMT1406 hypothetical protein. (204 aa)    
Predicted Functional Partners:
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
       0.811
EHA62026.1
KEGG: amr:AM1_1836 hypothetical protein.
  
     0.714
pepA
Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.690
EHA63511.1
Hypothetical protein; KEGG: pmt:PMT0232 putative hydrogenase accessory protein.
  
     0.665
EHA60612.1
KEGG: pmh:P9215_01091 high light inducible protein.
  
     0.661
EHA60225.1
KEGG: pmt:PMT0199 hypothetical protein.
  
     0.658
EHA60192.1
PFAM: Glutaredoxin-like; KEGG: pmf:P9303_21141 thioredoxin family protein.
  
     0.642
EHA62477.1
Hypothetical protein; KEGG: cyc:PCC7424_2925 putative signal transduction protein with EFhand domain.
  
     0.617
EHA64391.1
Transcriptional regulator, LuxR family; KEGG: pmf:P9303_05591 DNA-binding response regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal.
       0.603
EHA59279.1
PFAM: YCII-related; KEGG: pmf:P9303_23561 hypothetical protein.
  
     0.594
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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