STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepACytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (496 aa)    
Predicted Functional Partners:
EHA63121.1
TIGRFAM: Peptidase M1, alanyl aminopeptidase; KEGG: pmf:P9303_10001 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal.
  
 0.918
gshB
PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: pmf:P9303_27361 glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.880
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.878
EHA63841.1
Aspartate transaminase; KEGG: pmt:PMT0779 aminotransferase class-I; PFAM: Aminotransferase, class I/classII.
   
  0.869
petC
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
  
  0.771
EHA64393.1
KEGG: pmt:PMT1406 hypothetical protein.
       0.690
EHA64395.1
Hypothetical protein.
       0.665
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
       0.662
EHA60657.1
TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: pmt:PMT1978 O-acetylserine (thiol)-lyase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.635
EHA60201.1
TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; KEGG: pmj:P9211_04051 O-acetylserine (thiol)-lyase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.635
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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