STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62188.1KEGG: pmj:P9211_06741 hypothetical protein. (426 aa)    
Predicted Functional Partners:
EHA62186.1
KEGG: pmj:P9211_06761 mannosyl-3-phosphoglycerate phosphatase; TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3.
 
  
  0.970
EHA62187.1
Sucrose phosphorylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: pmj:P9211_06751 glycoside hydrolase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
   
 0.968
EHA62451.1
PFAM: Rod shape-determining protein MreC; KEGG: pmf:P9303_01801 rod shape-determining protein MreC.
  
 
 0.926
EHA63128.1
Helix-turn-helix domain protein; KEGG: pmt:PMT1070 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
    
 
 0.849
EHA64341.1
KEGG: syf:Synpcc7942_1056 XRE family transcriptional regulator.
    
 
 0.849
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.783
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.748
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
   0.515
EHA59148.1
TIGRFAM: Penicillin-binding protein 2; KEGG: pmt:PMT0048 putative penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
 
 
 
 0.445
EHA59425.1
KEGG: pmf:P9303_21891 putative septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase.
  
 
 0.425
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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