STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62192.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
EHA62189.1
PFAM: ABC-type glycine betaine transport system, substrate-binding domain; KEGG: pmf:P9303_16971 ABC transporter substrate binding protein, glycine betaine/proline family protein.
       0.613
EHA62190.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmf:P9303_16981 ABC transporter, membrane component, glycine betaine/proline family protein.
       0.613
EHA62191.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: pmt:PMT0553 glycine betaine/proline ABC transporter ATP-binding protein; PFAM: ABC transporter-like.
       0.613
EHA62193.1
PFAM: Methyltransferase type 11; KEGG: pmf:P9303_17011 glycine-sarcosine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Glycine N-methyltransferase family.
       0.558
EHA62194.1
PFAM: Methyltransferase type 11; KEGG: pmf:P9303_17021 putative sarcosine-dimethylglycine methyltransferase.
       0.558
EHA62195.1
PFAM: Protein of unknown function DUF985; KEGG: pmf:P9303_03601 hypothetical protein.
       0.558
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.401
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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