Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHA62207.1KEGG: pmt:PMT1805 hypothetical protein. (79 aa)    
Predicted Functional Partners:
EHA62208.1
NADH dehydrogenase (ubiquinone); KEGG: pmt:PMT1806 NAD binding site:FAD-dependent pyridine nucleotide-disulphide; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.571
EHA62206.1
KEGG: pmf:P9303_23901 hypothetical protein.
       0.520
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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