STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62208.1NADH dehydrogenase (ubiquinone); KEGG: pmt:PMT1806 NAD binding site:FAD-dependent pyridine nucleotide-disulphide; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (504 aa)    
Predicted Functional Partners:
petC
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
   
 
 0.805
petB
Cytochrome b/b6 domain protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
     
 0.774
EHA63025.1
TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.
    
 0.705
EHA62207.1
KEGG: pmt:PMT1805 hypothetical protein.
       0.570
EHA64136.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.544
menA
1,4-dihydroxy-2-naphthoate phytyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily.
    
  0.522
EHA64158.1
TIGRFAM: NAD(P)H dehydrogenase, subunit NdhF3; KEGG: cyn:Cyan7425_1619 NAD(P)H-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
   
 
 0.463
EHA61784.1
TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: pmt:PMT2009 NAD(P)H-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal.
   
 
 0.463
EHA59123.1
KEGG: pmf:P9303_00221 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.461
EHA64137.1
PFAM: Cytochrome c oxidase, subunit I; KEGG: pmh:P9215_16641 heme/copper-type cytochrome/quinol oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
     
 0.439
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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