STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62230.1KEGG: pmf:P9303_24401 bicarbonate transporter, ICT family protein; TIGRFAM: Inorganic carbon transporter; PFAM: O-antigen ligase-related. (439 aa)    
Predicted Functional Partners:
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
  
 
 0.830
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.806
EHA62231.1
PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: pmf:P9303_24411 N-acetylglucosamine kinase.
       0.784
EHA62228.1
Protein of unknown function DUF1745; KEGG: pmf:P9303_24381 hypothetical protein; PFAM: FIST domain, N-terminal; FIST C domain; SMART: FIST domain, N-terminal.
       0.783
EHA63401.1
KEGG: pmf:P9303_14991 hypothetical protein.
 
     0.685
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
 
 
 0.676
EHA62227.1
KEGG: pmt:PMT1818 hypothetical protein.
 
     0.627
EHA62424.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: pmf:P9303_26031 mannose-1-phosphate guanylyltransferase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase.
  
  
 0.604
EHA64293.1
PFAM: Protein of unknown function DUF177; KEGG: pmf:P9303_06081 metal-binding protein.
  
     0.590
EHA61751.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT1979 porin; Belongs to the OprB family.
  
     0.579
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.