STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62234.1PFAM: Lytic transglycosylase-like, catalytic; KEGG: pmt:PMT1824 soluble lytic transglycosylase. (696 aa)    
Predicted Functional Partners:
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
 
  
 0.689
EHA63639.1
FHA modulated glycosyl transferase/transpeptidase; KEGG: syf:Synpcc7942_2000 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Forkhead-associated (FHA) domain; Penicillin-binding protein, transpeptidase; SMART: Forkhead-associated (FHA) domain.
 
   
 0.623
EHA62233.1
Hypothetical protein.
       0.566
EHA63620.1
KEGG: pmf:P9303_18931 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
    
 0.526
EHA61918.1
CheW protein; KEGG: dak:DaAHT2_2535 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
 
    0.500
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.481
EHA61875.1
KEGG: pmf:P9303_27821 hypothetical protein.
 
  
 0.464
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
  
   
 0.437
EHA59157.1
SpoIID/LytB domain protein; KEGG: pmf:P9303_00621 putative amidase enhancer; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
  
     0.417
EHA61917.1
KEGG: dbr:Deba_2782 CheA signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; CheW-like protein; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; CheW-like protein.
 
    0.415
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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