STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62258.1KEGG: pmt:PMT1848 hypothetical protein. (88 aa)    
Predicted Functional Partners:
EHA62259.1
KEGG: pmf:P9303_24751 hypothetical protein.
 
     0.886
EHA60436.1
KEGG: pme:NATL1_18781 hypothetical protein.
  
     0.767
EHA62260.1
KEGG: pmf:P9303_24761 cytochrome c oxidase subunit Va.
       0.741
EHA63329.1
KEGG: pmt:PMT0769 hypothetical protein.
  
     0.722
EHA59098.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT2273 hypothetical protein.
  
     0.717
EHA63388.1
KEGG: pme:NATL1_11191 hypothetical protein.
  
     0.714
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
  
     0.709
EHA60549.1
KEGG: pmf:P9303_03171 hypothetical protein.
  
     0.685
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.682
EHA60548.1
KEGG: pmt:PMT1592 hypothetical protein.
  
     0.676
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.