STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62269.1KEGG: pmt:PMT1859 hypothetical protein. (122 aa)    
Predicted Functional Partners:
EHA60216.1
KEGG: pmf:P9303_21491 hypothetical protein.
  
     0.774
EHA64321.1
KEGG: pmt:PMT1344 hypothetical protein.
  
     0.773
EHA63949.1
KEGG: pmj:P9211_05761 hypothetical protein.
  
     0.772
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.772
EHA63064.1
KEGG: pmf:P9303_18171 hypothetical protein.
  
     0.771
EHA63189.1
KEGG: pmf:P9303_09541 hypothetical protein.
  
     0.771
EHA59355.1
KEGG: pmf:P9303_22651 hypothetical protein.
  
     0.771
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.768
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.767
EHA60360.1
KEGG: pmf:P9303_05231 hypothetical protein.
  
     0.766
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.