STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62281.1TIGRFAM: RecB family nuclease, TM0106, putative; KEGG: pmf:P9303_24981 RecB family nuclease. (495 aa)    
Predicted Functional Partners:
EHA64246.1
KEGG: pmf:P9303_07041 hypothetical protein.
  
     0.712
EHA63891.1
KEGG: pmf:P9303_17441 hypothetical protein.
  
     0.702
EHA64228.1
KEGG: pmj:P9211_04981 hypothetical protein.
  
     0.700
EHA64026.1
KEGG: pmf:P9303_18671 hypothetical protein.
  
     0.681
EHA64046.1
PFAM: Protein of unknown function DUF490; KEGG: pmt:PMT0438 hypothetical protein.
  
     0.673
EHA60360.1
KEGG: pmf:P9303_05231 hypothetical protein.
  
     0.669
EHA59098.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT2273 hypothetical protein.
  
     0.667
EHA63189.1
KEGG: pmf:P9303_09541 hypothetical protein.
  
     0.665
EHA62227.1
KEGG: pmt:PMT1818 hypothetical protein.
  
     0.665
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.662
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.