STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62291.19-cis-epoxycarotenoid dioxygenase; KEGG: pmt:PMT1879 retinal pigment epithelial membrane protein; PFAM: Carotenoid oxygenase. (495 aa)    
Predicted Functional Partners:
hisB
HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: pmf:P9303_25121 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase.
       0.592
EHA61778.1
Phytoene synthase; KEGG: pmj:P9211_01581 squalene and phytoene synthase; PFAM: Squalene/phytoene synthase.
     
 0.580
EHA62293.1
KEGG: msp:Mspyr1_28760 hypothetical protein.
       0.557
EHA60574.1
KEGG: pmf:P9303_02971 hypothetical protein; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase.
  
  
  0.541
EHA58630.1
KEGG: tmz:Tmz1t_2975 amine oxidase; PFAM: Amine oxidase.
  
   
 0.537
EHA63498.1
PFAM: Cytochrome P450; KEGG: ota:Ot07g01610 5-alpha-taxadienol-10-beta-hydroxylase; Tm10bh (ISS).
  
   
 0.526
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
 
  
 0.513
EHA63672.1
KEGG: dge:Dgeo_0202 uridine kinase.
     
 0.510
EHA62290.1
PFAM: Protein of unknown function DUF541; KEGG: pmf:P9303_25021 hypothetical protein.
       0.497
EHA63489.1
PFAM: Cytochrome P450; KEGG: pmf:P9303_03561 cytochrome P450 enzyme.
  
   
 0.491
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.