STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62304.1PFAM: Mammalian cell entry-related; KEGG: pmt:PMT1888 putative ABC transporter. (297 aa)    
Predicted Functional Partners:
EHA62305.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_25221 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 0.998
EHA64382.1
PFAM: Domain of unknown function DUF140; KEGG: pmt:PMT1399 putative transporter, membrane component.
 
 0.994
EHA63708.1
PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: pmf:P9303_15781 STAS domain-containing protein; Belongs to the anti-sigma-factor antagonist family.
  
  0.939
EHA60080.1
KEGG: pmf:P9303_19571 hypothetical protein.
  
   
 0.605
EHA63286.1
KEGG: pmf:P9303_14221 hypothetical protein.
  
   
 0.597
EHA62306.1
Uncharacterized protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.584
EHA64046.1
PFAM: Protein of unknown function DUF490; KEGG: pmt:PMT0438 hypothetical protein.
 
   
 0.538
EHA63146.1
KEGG: pmt:PMT1075 hypothetical protein.
  
     0.450
EHA64402.1
PFAM: Bacterial surface antigen (D15); Surface antigen variable number; Polypeptide-transport-associated, ShlB-type; KEGG: pmf:P9303_05491 outer envelope membrane protein.
 
     0.447
EHA63891.1
KEGG: pmf:P9303_17441 hypothetical protein.
  
     0.429
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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