STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62306.1Uncharacterized protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (451 aa)    
Predicted Functional Partners:
EHA62304.1
PFAM: Mammalian cell entry-related; KEGG: pmt:PMT1888 putative ABC transporter.
       0.584
EHA62305.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_25221 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.584
EHA63155.1
KEGG: pmt:PMT1079 membrane bound transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator.
  
     0.548
EHA63125.1
KEGG: pmt:PMT1072 LytR-membrane bound transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator.
  
     0.538
EHA62242.1
KEGG: pmf:P9303_24571 hypothetical protein.
  
     0.469
EHA63438.1
KEGG: pmf:P9303_15321 hypothetical protein; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
  
     0.463
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
 
   
 0.435
EHA62241.1
Transcriptional regulator, Crp/Fnr family; TIGRFAM: Transcription regulator, NtcA; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; KEGG: pmg:P9301_02691 CRP family global nitrogen regulatory protein; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain.
  
     0.434
EHA61750.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.422
EHA63633.1
KEGG: syf:Synpcc7942_2356 Crp/FNR family transcriptional regulator; PFAM: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain; SMART: HTH transcriptional regulator, Crp.
  
     0.419
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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