STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62316.1KEGG: cyn:Cyan7425_2155 hypothetical protein. (150 aa)    
Predicted Functional Partners:
EHA58636.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: amr:AM1_2519 hypothetical protein.
  
     0.693
EHA62296.1
KEGG: ava:Ava_0939 hypothetical protein.
  
     0.631
EHA61818.1
PFAM: Protein of unknown function DUF456; KEGG: pmt:PMT2047 hypothetical protein.
  
     0.604
EHA62492.1
KEGG: cyj:Cyan7822_1390 hypothetical protein.
  
     0.567
EHA64134.1
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: pmh:P9215_16611 hypothetical protein; overlaps another CDS with the same product name.
  
     0.545
EHA63243.1
KEGG: pmt:PMT0821 hypothetical protein.
  
     0.540
EHA59260.1
Radical SAM domain protein; KEGG: pmf:P9303_23771 Fe-S oxidoreductase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
  
     0.540
EHA64135.1
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: pmc:P9515_12621 hypothetical protein; overlaps another CDS with the same product name.
  
     0.522
EHA63214.1
PFAM: Aminoglycoside phosphotransferase; KEGG: pmt:PMT0868 hypothetical protein.
  
     0.521
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.475
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.