STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62326.1PFAM: Glycosyl transferase, family 2; KEGG: ssm:Spirs_4232 glycosyl transferase family 2. (292 aa)    
Predicted Functional Partners:
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
 
 
 0.670
EHA62325.1
Hypothetical protein.
       0.559
EHA63832.1
PFAM: Glycosyl transferase, family 2; KEGG: pmt:PMT0585 glycosyl transferase family protein.
  
  
 0.534
EHA62513.1
Hypothetical protein; KEGG: ace:Acel_0422 glycosyl transferase family protein.
 
 
 0.522
EHA62431.1
Dolichyl-phosphate beta-D-mannosyltransferase; KEGG: pmf:P9303_26101 putative glycosyl transferase; PFAM: Glycosyl transferase, family 2; GtrA-like protein.
  
 
0.508
EHA62330.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_25651 putative glycosyl transferase, group 1; overlaps another CDS with the same product name.
  
 
  0.462
EHA62329.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_25641 glycosyl transferase, group 1; overlaps another CDS with the same product name.
  
 
  0.452
EHA62380.1
PFAM: Glycosyl transferase, group 1; KEGG: hdn:Hden_0447 glycosyl transferase group 1.
  
 
  0.442
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
   
 
 0.412
EHA62377.1
PFAM: Glycosyl transferase, group 1; KEGG: hdn:Hden_0446 glycosyl transferase group 1.
  
 
  0.411
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.