STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62334.1PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_25681 hypothetical protein. (366 aa)    
Predicted Functional Partners:
EHA62335.1
KEGG: pmt:PMT1685 heme oxygenase; PFAM: Heme oxygenase-like.
   
   0.824
EHA62336.1
KEGG: pmj:P9211_17161 hypothetical protein.
 
     0.775
EHA60240.1
Maltose alpha-D-glucosyltransferase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: cyb:CYB_0677 trehalose synthase/putative maltokinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
    
 0.749
EHA63388.1
KEGG: pme:NATL1_11191 hypothetical protein.
  
     0.715
EHA63243.1
KEGG: pmt:PMT0821 hypothetical protein.
  
     0.703
EHA63888.1
KEGG: pmf:P9303_17401 hypothetical protein.
  
     0.680
EHA64379.1
KEGG: pmt:PMT1396 hypothetical protein.
  
     0.678
EHA63215.1
KEGG: pmf:P9303_13271 hypothetical protein.
  
     0.666
EHA63964.1
KEGG: pmf:P9303_11021 hypothetical protein.
  
  
  0.632
EHA64363.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pmf:P9303_06851 short chain dehydrogenase.
  
 
  0.603
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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