STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62335.1KEGG: pmt:PMT1685 heme oxygenase; PFAM: Heme oxygenase-like. (237 aa)    
Predicted Functional Partners:
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
 
  
 0.958
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.926
EHA60357.1
KEGG: pmf:P9303_05261 ferredoxin; TIGRFAM: Ferredoxin [2Fe-2S], plant; PFAM: Ferredoxin.
    
 
 0.860
EHA62334.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_25681 hypothetical protein.
   
   0.824
pebA
15,16-dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
 
  
 0.799
EHA60469.1
HAMAP: Aspartoacylase; KEGG: pmf:P9303_04021 aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.687
pebB
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
 
  
 0.648
EHA62336.1
KEGG: pmj:P9211_17161 hypothetical protein.
       0.619
EHA63610.1
Ferritin Dps family protein; Iron-storage protein.
    
 0.568
EHA59373.1
KEGG: mar:MAE_24450 phycocyanin beta subunit; TIGRFAM: Phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
   
 0.551
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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