STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62350.1PFAM: Protein of unknown function DUF1778; KEGG: apa:APP7_1600 hypothetical protein. (121 aa)    
Predicted Functional Partners:
EHA62351.1
KEGG: gvi:glr3475 hypothetical protein.
 
 
   0.984
EHA63888.1
KEGG: pmf:P9303_17401 hypothetical protein.
 
 
   0.846
EHA63139.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: pmt:PMT1060 putative ribosomal-protein-alanine acetyltransferase.
   
   0.804
EHA64146.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: pmt:PMT1191 putative acetyltransferase.
   
   0.804
EHA59345.1
KEGG: pmf:P9303_22751 hypothetical protein.
   
   0.804
EHA62204.1
KEGG: pmf:P9303_07051 hypothetical protein.
  
     0.583
EHA63465.1
Endolysin; KEGG: pmt:PMT0664 endolysin.
  
     0.569
vapC-3
PIN domain protein family protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.565
vapC-4
PIN domain protein family protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.560
EHA64255.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein; Belongs to the OprB family.
  
     0.540
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.