STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62351.1KEGG: gvi:glr3475 hypothetical protein. (157 aa)    
Predicted Functional Partners:
EHA62350.1
PFAM: Protein of unknown function DUF1778; KEGG: apa:APP7_1600 hypothetical protein.
 
 
   0.984
EHA63580.1
KEGG: acr:Acry_3181 hypothetical protein.
  
     0.625
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.622
EHA62349.1
PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: dak:DaAHT2_1521 filamentation induced by cAMP protein Fic.
 
     0.613
EHA61774.1
Universal protein YeaZ; KEGG: pmt:PMT1999 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease.
  
 0.566
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.557
EHA62404.1
PFAM: PilT protein, N-terminal; KEGG: aac:Aaci_0602 PilT protein domain protein.
  
     0.530
EHA62352.1
Hypothetical protein.
       0.527
EHA62969.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
  0.521
EHA63080.1
IMP dehydrogenase family protein; KEGG: pmf:P9303_09131 inosine 5-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase-related 2; PFAM: IMP dehydrogenase/GMP reductase.
  
  
  0.489
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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