STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62369.1PFAM: Glycosyl transferase, family 2; KEGG: pmc:P9515_13751 hypothetical protein. (275 aa)    
Predicted Functional Partners:
EHA62368.1
KEGG: pmc:P9515_13741 hypothetical protein.
 
 
  0.904
EHA62370.1
Hypothetical protein.
       0.773
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
  
 
 0.610
EHA62204.1
KEGG: pmf:P9303_07051 hypothetical protein.
  
     0.591
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
     0.589
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
   
 0.569
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.562
EHA62056.1
PFAM: O-antigen ligase-related; KEGG: pmf:P9303_30011 hypothetical protein.
  
  
 0.542
EHA64255.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein; Belongs to the OprB family.
  
     0.537
EHA62058.1
TIGRFAM: Photosystem II PsbQ, cyanobacteria; KEGG: cyj:Cyan7822_5451 photosystem II protein PsbQ.
  
     0.521
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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