Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHA62375.1PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_0334 methyltransferase type 11. (224 aa)    
Predicted Functional Partners:
EHA62376.1
KEGG: pmc:P9515_14181 hypothetical protein.
       0.773
EHA62377.1
PFAM: Glycosyl transferase, group 1; KEGG: hdn:Hden_0446 glycosyl transferase group 1.
       0.773
EHA62372.1
PFAM: Glycosyl transferase, group 1; KEGG: pmc:P9515_13771 hypothetical protein.
       0.461
EHA62373.1
KEGG: pmc:P9515_13781 hypothetical protein.
       0.461
EHA62374.1
PFAM: Glycosyl transferase, group 1; KEGG: pmc:P9515_13791 hypothetical protein.
       0.461
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
     
 0.428
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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