STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62381.1PFAM: Methyltransferase type 11; KEGG: pmc:P9515_14091 hypothetical protein. (332 aa)    
Predicted Functional Partners:
EHA62303.1
Cobaltochelatase subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.947
EHA62382.1
PFAM: Glycosyl transferase, group 1; KEGG: pmc:P9515_13821 hypothetical protein.
 
     0.800
EHA62380.1
PFAM: Glycosyl transferase, group 1; KEGG: hdn:Hden_0447 glycosyl transferase group 1.
       0.773
EHA63255.1
KEGG: pmt:PMT0812 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding.
    
 0.631
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
  
 0.624
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
  
 0.624
EHA62383.1
Hypothetical protein.
       0.592
EHA63083.1
TIGRFAM: Lycopene cyclase, beta/epsilon; KEGG: pmf:P9303_09161 putative lycopene beta cyclase; PFAM: Lycopene cyclase-type, FAD-binding.
    
 0.503
EHA63683.1
PFAM: FAD dependent oxidoreductase; KEGG: bbe:BBR47_17220 hypothetical protein.
    
 0.503
EHA63132.1
ABC-1 domain-containing protein; PFAM: ABC-1; KEGG: pmt:PMT1067 kinase.
    
 0.492
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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