STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62386.1Glutamine--scyllo-inositol transaminase; KEGG: reu:Reut_B5377 DegT/DnrJ/EryC1/StrS aminotransferase:aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (394 aa)    
Predicted Functional Partners:
EHA62384.1
TIGRFAM: Sialic acid O-acyltransferase, NeuD; KEGG: nla:NLA_17580 pilin glycosylation protein PglB.
 
 
 0.952
EHA59185.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: pmt:PMT0115 dTDP-glucose-4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.870
EHA62276.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: pmf:P9303_24931 putative oxidoreductase.
 
 
 0.844
EHA62364.1
PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: pma:Pro0679 nucleotide-diphosphate-sugar epimerase, membrane associated.
 
 
 0.814
EHA62365.1
KEGG: pme:NATL1_08591 nucleotide-diphosphate-sugar epimerase, membrane associated.
 
 
 0.813
EHA62371.1
KEGG: cyn:Cyan7425_4965 putative colanic acid biosynthesis acetyltransferase WcaF.
  
 
 0.778
EHA63874.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: pmf:P9303_17291 putative oxidoreductase.
 
 
 0.744
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.708
EHA64355.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmt:PMT1312 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.681
EHA59093.1
TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase domain; Sucrose phosphate synthase, sucrose phosphatase-like domain; KEGG: pmf:P9303_30171 sucrose phosphate synthase; PFAM: Sucrose-phosphate synthase; Glycosyl transferase, group 1; Sucrose synthase.
  
 
 0.643
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.