STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62388.1KEGG: sli:Slin_2579 hypothetical protein. (284 aa)    
Predicted Functional Partners:
EHA62387.1
PFAM: Glycosyl transferase, family 2; KEGG: bcg:BCG9842_B3380 glycosyl transferase, group 2 family protein.
 
     0.833
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
  
 
 0.610
EHA62389.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; KEGG: pvi:Cvib_0616 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.531
EHA62390.1
Hypothetical protein.
       0.520
EHA60532.1
PFAM: Tetratricopeptide TPR-1; KEGG: amr:AM1_5932 pentapeptide repeat-containing serine/threonine kinase.
  
 
 
 0.502
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
  0.457
EHA62513.1
Hypothetical protein; KEGG: ace:Acel_0422 glycosyl transferase family protein.
  
 
 0.457
EHA62331.1
PFAM: Glycosyl transferase, group 1; KEGG: pma:Pro0057 glycosyltransferase.
  
 
  0.446
EHA62374.1
PFAM: Glycosyl transferase, group 1; KEGG: pmc:P9515_13791 hypothetical protein.
  
 
  0.439
EHA63474.1
PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: pmf:P9303_28691 hypothetical protein.
 
 
 
 0.433
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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