STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62398.1KEGG: mar:MAE_55730 hypothetical protein. (68 aa)    
Predicted Functional Partners:
EHA58642.1
KEGG: syn:slr1774 hypothetical protein.
  
     0.565
EHA62400.1
Hypothetical protein; KEGG: gur:Gura_1404 PilT domain-containing protein.
 
     0.522
EHA62401.1
Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: pph:Ppha_2558 transcriptional regulator, AbrB family; SMART: Transcription regulator AbrB/SpoV, predicted.
 
     0.499
EHA62397.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmt:PMT1958 NAD-dependent epimerase/dehydratase family protein.
       0.493
EHA62396.1
Hypothetical protein.
       0.469
EHA62399.1
Hypothetical protein.
       0.433
EHA61755.1
KEGG: pmf:P9303_26291 4-amino-4-deoxy-L-arabinose transferase.
  
     0.417
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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