STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62420.1Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; KEGG: pmc:P9515_13861 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis. (818 aa)    
Predicted Functional Partners:
EHA62419.1
PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: pmc:P9515_13851 hypothetical protein.
 
 0.999
EHA62384.1
TIGRFAM: Sialic acid O-acyltransferase, NeuD; KEGG: nla:NLA_17580 pilin glycosylation protein PglB.
  
 
 0.994
EHA60120.1
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: pmf:P9303_20081 galactosyl-1-phosphate transferase; PFAM: Bacterial sugar transferase.
 
 
 0.980
EHA59184.1
KEGG: pmf:P9303_25451 sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase.
 
 
 0.979
EHA62364.1
PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: pma:Pro0679 nucleotide-diphosphate-sugar epimerase, membrane associated.
 
 
 0.947
EHA62424.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: pmf:P9303_26031 mannose-1-phosphate guanylyltransferase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase.
  
 
 0.941
EHA62365.1
KEGG: pme:NATL1_08591 nucleotide-diphosphate-sugar epimerase, membrane associated.
  
 
 0.939
EHA64355.1
TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmt:PMT1312 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
 0.881
EHA59368.1
PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: pmf:P9303_22461 low molecular weight phosphotyrosine protein phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
 
 0.858
ndhJ
NAD(P)H-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
     
 0.846
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.