STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62442.1KEGG: pmf:P9303_01891 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor. (422 aa)    
Predicted Functional Partners:
EHA62443.1
Methyltransferase; KEGG: pmt:PMT0151 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260.
 
 0.998
EHA62457.1
KEGG: gvi:glr1903 hypothetical protein.
   
   0.759
EHA58637.1
PFAM: Sulfatase; KEGG: pmt:PMT1515 sulfatase.
   
   0.759
EHA62441.1
SMART: Serine/threonine-protein kinase domain; KEGG: pmf:P9303_01911 protein kinase:serine/threonine protein kinase.
  
 
 0.694
EHA62444.1
KEGG: pmt:PMT0150 hypothetical protein.
       0.694
EHA62445.1
KEGG: pmt:PMT0149 hypothetical protein.
       0.682
EHA60532.1
PFAM: Tetratricopeptide TPR-1; KEGG: amr:AM1_5932 pentapeptide repeat-containing serine/threonine kinase.
  
 
 0.552
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.539
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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