STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62445.1KEGG: pmt:PMT0149 hypothetical protein. (161 aa)    
Predicted Functional Partners:
EHA62444.1
KEGG: pmt:PMT0150 hypothetical protein.
       0.774
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.770
EHA63131.1
KEGG: syf:Synpcc7942_0114 hypothetical protein.
  
     0.769
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.769
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.765
EHA64212.1
KEGG: pmf:P9303_07491 hypothetical protein.
  
     0.764
EHA63302.1
OstA family protein; PFAM: Organic solvent tolerance-like, N-terminal; KEGG: pmt:PMT0573 hypothetical protein.
  
     0.763
EHA64283.1
KEGG: pmf:P9303_05981 hypothetical protein.
  
     0.756
EHA63368.1
Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein.
  
     0.752
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.751
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.