Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA62457.1KEGG: gvi:glr1903 hypothetical protein. (276 aa)    
Predicted Functional Partners:
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
 
 0.924
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
 
 0.921
EHA62467.1
KEGG: gvi:gll4222 hypothetical protein.
  
  
  0.800
EHA62464.1
PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: sus:Acid_1975 type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.784
EHA62474.1
PFAM: 4'-phosphopantetheinyl transferase; KEGG: gvi:gll4225 glycolipid synthase.
 
     0.783
EHA62473.1
PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: gvi:gll4225 glycolipid synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
 
     0.779
EHA62462.1
KEGG: pbr:PB2503_07444 hypothetical protein.
  
    0.773
EHA62469.1
KEGG: gvi:glr1904 hypothetical protein.
  
     0.773
EHA61982.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pmf:P9303_17961 short-chain dehydrogenase/reductase (SDR) superfamily protein.
  
 
  0.731
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
     
  0.708
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.