STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62469.1KEGG: gvi:glr1904 hypothetical protein. (371 aa)    
Predicted Functional Partners:
EHA62467.1
KEGG: gvi:gll4222 hypothetical protein.
 
     0.937
EHA62464.1
PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: sus:Acid_1975 type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.887
EHA62462.1
KEGG: pbr:PB2503_07444 hypothetical protein.
 
     0.853
EHA62465.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: dsh:Dshi_5003 hypothetical protein.
 
     0.830
EHA62457.1
KEGG: gvi:glr1903 hypothetical protein.
  
     0.773
EHA62466.1
3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: bay:RBAM_037840 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.773
EHA62468.1
KEGG: cyh:Cyan8802_1862 hypothetical protein.
       0.773
EHA62470.1
Hypothetical protein.
       0.773
EHA62474.1
PFAM: 4'-phosphopantetheinyl transferase; KEGG: gvi:gll4225 glycolipid synthase.
  
     0.772
EHA62473.1
PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: gvi:gll4225 glycolipid synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
  
     0.753
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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